Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ldb2O55203 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ldb2O55203 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ldb2O55203 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Gm11531-201ENSMUST00000117614 555 ntBASIC12.34□□□□□ -0.43
Ldb2O55203 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.34□□□□□ -0.43
Ldb2O55203 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.34□□□□□ -0.43
Ldb2O55203 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.34□□□□□ -0.43
Ldb2O55203 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.34□□□□□ -0.43
Ldb2O55203 Gm27501-201ENSMUST00000183599 107 ntBASIC12.34□□□□□ -0.43
Ldb2O55203 Gm27390-201ENSMUST00000184516 176 ntBASIC12.34□□□□□ -0.43
Ldb2O55203 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.34□□□□□ -0.43
Ldb2O55203 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb2O55203 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.34□□□□□ -0.43
Ldb2O55203 Gm6013-201ENSMUST00000212264 699 ntBASIC12.34□□□□□ -0.43
Ldb2O55203 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.34□□□□□ -0.43
Ldb2O55203 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.34□□□□□ -0.43
Ldb2O55203 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ldb2O55203 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ldb2O55203 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Ldb2O55203 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ldb2O55203 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ldb2O55203 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ldb2O55203 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.33□□□□□ -0.43
Ldb2O55203 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.33□□□□□ -0.44
Ldb2O55203 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 Gm25214-201ENSMUST00000104573 129 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ldb2O55203 Gm15198-201ENSMUST00000117283 177 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 Gm4986-201ENSMUST00000119731 549 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.33□□□□□ -0.44
Ldb2O55203 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ldb2O55203 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.33□□□□□ -0.44
Ldb2O55203 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ldb2O55203 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ldb2O55203 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ldb2O55203 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Ldb2O55203 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.33□□□□□ -0.44
Ldb2O55203 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ldb2O55203 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ldb2O55203 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ldb2O55203 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ldb2O55203 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.32□□□□□ -0.44
Ldb2O55203 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ldb2O55203 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ldb2O55203 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ldb2O55203 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb2O55203 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ldb2O55203 Gm15370-201ENSMUST00000117158 253 ntBASIC12.32□□□□□ -0.44
Ldb2O55203 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.32□□□□□ -0.44
Ldb2O55203 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ldb2O55203 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.32□□□□□ -0.44
Ldb2O55203 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms