Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gm9396-201ENSMUST00000076703 567 ntBASIC13.21□□□□□ -0.29
Kcnu1O54982 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Kcnu1O54982 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Kcnu1O54982 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Kcnu1O54982 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Kcnu1O54982 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Kcnu1O54982 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Kcnu1O54982 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.21□□□□□ -0.3
Kcnu1O54982 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Kcnu1O54982 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Kcnu1O54982 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.2□□□□□ -0.3
Kcnu1O54982 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Gm13829-201ENSMUST00000119600 138 ntBASIC13.2□□□□□ -0.3
Kcnu1O54982 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Kcnu1O54982 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Kcnu1O54982 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.2□□□□□ -0.3
Kcnu1O54982 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Kcnu1O54982 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.19□□□□□ -0.3
Kcnu1O54982 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Kcnu1O54982 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.19□□□□□ -0.3
Kcnu1O54982 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm42937-201ENSMUST00000197360 752 ntBASIC13.19□□□□□ -0.3
Kcnu1O54982 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Kcnu1O54982 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Kcnu1O54982 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Kcnu1O54982 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Kcnu1O54982 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.18□□□□□ -0.3
Kcnu1O54982 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.18□□□□□ -0.3
Kcnu1O54982 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Kcnu1O54982 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms