Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Gm15824-201ENSMUST00000119516 955 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Gm10268-201ENSMUST00000085340 555 ntBASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh9F8VPK8 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Gm40466-201ENSMUST00000212174 422 ntBASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh9F8VPK8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms