Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm24845-201ENSMUST00000158034 109 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm30285-201ENSMUST00000214614 422 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cpsf4lE9Q2N0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Mir1938-201ENSMUST00000158746 100 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Gm26956-201ENSMUST00000182176 986 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Gm45865-201ENSMUST00000211815 945 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Cts7-204ENSMUST00000225321 1257 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.5□□□□□ -0.73
Cpsf4lE9Q2N0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms