Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Gm11597-201ENSMUST00000121423 964 ntBASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Gm29649-201ENSMUST00000185649 419 ntBASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Gm9794-201ENSMUST00000202370 423 ntBASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc112A0AUP1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm27839-201ENSMUST00000184242 106 ntBASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm5035-201ENSMUST00000215581 927 ntBASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc112A0AUP1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc112A0AUP1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms