Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm23931-201ENSMUST00000103842 109 ntBASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Gm13342-201ENSMUST00000121055 207 ntBASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.42□□□□□ -0.42
H2afb2S4R1M3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm5187-201ENSMUST00000117317 991 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm6023-201ENSMUST00000118217 606 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm27390-201ENSMUST00000184516 176 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm18062-201ENSMUST00000208020 547 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm18055-201ENSMUST00000208254 547 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms