Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm37826-201ENSMUST00000195329 322 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.15□□□□□ -0.46
Col4a4Q9QZR9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a4Q9QZR9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.15□□□□□ -0.47
Col4a4Q9QZR9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Col4a4Q9QZR9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.15□□□□□ -0.47
Col4a4Q9QZR9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.15□□□□□ -0.47
Col4a4Q9QZR9 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col4a4Q9QZR9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm9162-201ENSMUST00000182081 991 ntBASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a4Q9QZR9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm23612-201ENSMUST00000103823 110 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm13204-201ENSMUST00000120110 821 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm23576-201ENSMUST00000179918 110 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm8197-202ENSMUST00000193422 934 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm11942-201ENSMUST00000180255 345 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm9081-201ENSMUST00000182346 991 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm9192-201ENSMUST00000183221 985 ntBASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a4Q9QZR9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms