Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Smc3Q9CW03 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Smc3Q9CW03 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm9794-201ENSMUST00000202370 423 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm6091-201ENSMUST00000098307 165 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.61□□□□□ -0.07
Smc3Q9CW03 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smc3Q9CW03 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Map1b-203ENSMUST00000223725 2669 ntBASIC14.6□□□□□ -0.07
Smc3Q9CW03 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.6□□□□□ -0.07
Smc3Q9CW03 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smc3Q9CW03 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.6□□□□□ -0.07
Smc3Q9CW03 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smc3Q9CW03 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.59□□□□□ -0.07
Smc3Q9CW03 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.59□□□□□ -0.07
Smc3Q9CW03 Gm11964-201ENSMUST00000120982 444 ntBASIC14.59□□□□□ -0.07
Smc3Q9CW03 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smc3Q9CW03 Gm9022-201ENSMUST00000182482 992 ntBASIC14.59□□□□□ -0.07
Smc3Q9CW03 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms