Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61bQ9CQS8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61bQ9CQS8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61bQ9CQS8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61bQ9CQS8 Gm37980-201ENSMUST00000194420 1910 ntBASIC6.88□□□□□ -1.31
Sec61bQ9CQS8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sec61bQ9CQS8 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm44775-201ENSMUST00000207266 1456 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm4732-201ENSMUST00000118778 473 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm14587-201ENSMUST00000121714 658 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm15276-201ENSMUST00000145953 498 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm25026-201ENSMUST00000175017 188 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm27023-201ENSMUST00000182372 285 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm37259-201ENSMUST00000193903 849 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm38158-201ENSMUST00000194617 339 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm36987-201ENSMUST00000194704 2979 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm38094-201ENSMUST00000195864 2978 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm19208-201ENSMUST00000213861 912 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm18329-201ENSMUST00000215832 589 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 AC154828.2-201ENSMUST00000220908 1070 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 CT030182.1-201ENSMUST00000225935 533 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Gm7899-201ENSMUST00000192935 1897 ntBASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sec61bQ9CQS8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms