Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm12997-201ENSMUST00000120207 640 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm5070-201ENSMUST00000177599 862 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm25700-201ENSMUST00000177693 110 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm26035-201ENSMUST00000083065 308 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm7Q9CQQ8 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm12015-201ENSMUST00000117065 843 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm6963-201ENSMUST00000147879 379 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Cog3-203ENSMUST00000227473 4197 ntBASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lsm7Q9CQQ8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lsm7Q9CQQ8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms