Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm15824-201ENSMUST00000119516 955 ntBASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga3Q91XY5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gm1335-201ENSMUST00000121653 386 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gm7029-201ENSMUST00000173226 450 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gm18187-201ENSMUST00000196476 984 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gm6266-201ENSMUST00000203844 806 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Gm40466-201ENSMUST00000212174 422 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga3Q91XY5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga3Q91XY5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms