Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm22121-201ENSMUST00000175148 54 ntBASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm27552-201ENSMUST00000183351 62 ntBASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm27844-201ENSMUST00000183613 62 ntBASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga6Q91XY2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Gm13875-201ENSMUST00000120162 282 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Gm19459-201ENSMUST00000176240 835 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Rprl1-202ENSMUST00000198476 238 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.43□□□□□ -0.42
Pcdhga6Q91XY2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga6Q91XY2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms