Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 AL607033.1-201ENST00000623900 1599 ntBASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC33Q8N5R6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 AC090616.6-203ENST00000579186 1945 ntBASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 AC105250.1-201ENST00000509378 2057 ntBASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.33■□□□□ 0.21
CCDC33Q8N5R6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 MIR658-201ENST00000385210 100 ntBASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 AC099063.4-201ENST00000641099 1602 ntBASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC33Q8N5R6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC33Q8N5R6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms