Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm18636-201ENSMUST00000218846 1066 ntBASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ddx54Q8K4L0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm15784-201ENSMUST00000120260 1462 ntBASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Ap3s1-202ENSMUST00000224622 978 ntBASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Ddx54Q8K4L0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Gm8731-201ENSMUST00000118088 412 ntBASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Gm25604-201ENSMUST00000158359 133 ntBASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx54Q8K4L0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Gm24231-201ENSMUST00000104315 133 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Gm12579-201ENSMUST00000118040 783 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Gm12943-201ENSMUST00000119616 210 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 AC136376.2-201ENSMUST00000228819 490 ntBASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx54Q8K4L0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms