Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trim9Q8C7M3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.71□□□□□ -0.22
Trim9Q8C7M3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trim9Q8C7M3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim9Q8C7M3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm7046-201ENSMUST00000221351 977 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.69□□□□□ -0.22
Trim9Q8C7M3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms