Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Gm13809-201ENSMUST00000117921 597 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a6Q8C6K9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Gm34023-201ENSMUST00000195539 217 ntBASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Gm9996-201ENSMUST00000070359 913 ntBASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col6a6Q8C6K9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Gm12795-201ENSMUST00000117594 539 ntBASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Gm13937-201ENSMUST00000121000 988 ntBASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Col6a6Q8C6K9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm15573-201ENSMUST00000119487 540 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col6a6Q8C6K9 Gm6867-201ENSMUST00000219165 425 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms