Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Mir7684-201ENSMUST00000183858 60 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm7063-201ENSMUST00000186840 981 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm28693-202ENSMUST00000190758 331 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm6983-201ENSMUST00000214912 628 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 AC154838.2-201ENSMUST00000226602 747 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Itm2b-204ENSMUST00000228637 783 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gm28359-201ENSMUST00000187470 1322 ntBASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lsm11Q8BUV6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm14057-201ENSMUST00000120631 482 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm14760-201ENSMUST00000121831 999 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Mir7023-201ENSMUST00000185093 64 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm44397-201ENSMUST00000195950 113 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 AC118006.2-201ENSMUST00000224167 962 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 AC165260.4-201ENSMUST00000225924 724 ntBASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lsm11Q8BUV6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms