Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm23363-201ENSMUST00000175024 79 ntBASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm29649-201ENSMUST00000185649 419 ntBASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Otub1Q7TQI3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Otub1Q7TQI3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Gm12390-201ENSMUST00000117897 397 ntBASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Gm16177-201ENSMUST00000120728 718 ntBASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Gm32025-201ENSMUST00000217960 307 ntBASIC11.83□□□□□ -0.52
Otub1Q7TQI3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Otub1Q7TQI3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Otub1Q7TQI3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms