Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gm45550-201ENSMUST00000209380 946 ntBASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gm45398-201ENSMUST00000210561 165 ntBASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm15004-201ENSMUST00000119192 630 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm11836-201ENSMUST00000121022 441 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm12029-201ENSMUST00000120073 832 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm15566-201ENSMUST00000121130 590 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Gm43186-201ENSMUST00000198130 824 ntBASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup98Q6PFD9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm11246-201ENSMUST00000120880 345 ntBASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm11660-201ENSMUST00000120955 412 ntBASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm4726-201ENSMUST00000135604 736 ntBASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm6019-201ENSMUST00000148369 736 ntBASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup98Q6PFD9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms