Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc85bQ6PDY0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc85bQ6PDY0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc85bQ6PDY0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc85bQ6PDY0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc85bQ6PDY0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc85bQ6PDY0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm14644-201ENSMUST00000116671 647 ntBASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc85bQ6PDY0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm4726-201ENSMUST00000135604 736 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm6019-201ENSMUST00000148369 736 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm10774-201ENSMUST00000188689 204 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm45120-201ENSMUST00000208880 408 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Mt1-202ENSMUST00000211807 1085 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Mir483-201ENSMUST00000093631 73 ntBASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc85bQ6PDY0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms