Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Satb1Q60611 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Satb1Q60611 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.98□□□□□ -0.33
Satb1Q60611 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Satb1Q60611 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.98□□□□□ -0.33
Satb1Q60611 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.98□□□□□ -0.33
Satb1Q60611 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.98□□□□□ -0.33
Satb1Q60611 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.98□□□□□ -0.33
Satb1Q60611 Gm45433-201ENSMUST00000209386 247 ntBASIC12.98□□□□□ -0.33
Satb1Q60611 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.98□□□□□ -0.33
Satb1Q60611 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.98□□□□□ -0.33
Satb1Q60611 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.98□□□□□ -0.33
Satb1Q60611 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Satb1Q60611 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.98□□□□□ -0.33
Satb1Q60611 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Satb1Q60611 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Satb1Q60611 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Satb1Q60611 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Satb1Q60611 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Satb1Q60611 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm12795-201ENSMUST00000117594 539 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm8913-201ENSMUST00000209491 641 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.97□□□□□ -0.33
Satb1Q60611 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Satb1Q60611 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.97□□□□□ -0.33
Satb1Q60611 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Satb1Q60611 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Satb1Q60611 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Satb1Q60611 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.96□□□□□ -0.33
Satb1Q60611 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
Satb1Q60611 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Satb1Q60611 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Satb1Q60611 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms