Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Gm9022-201ENSMUST00000182482 992 ntBASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Gm5745-201ENSMUST00000183748 313 ntBASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Trim38Q5SZ99 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm12314-201ENSMUST00000118104 538 ntBASIC12.91□□□□□ -0.34
Trim38Q5SZ99 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm27390-201ENSMUST00000184516 176 ntBASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm18187-201ENSMUST00000196476 984 ntBASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim38Q5SZ99 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim38Q5SZ99 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms