Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm10146-201ENSMUST00000072739 309 ntBASIC12.32□□□□□ -0.44
Scn2bQ56A07 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm24231-201ENSMUST00000104315 133 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm13226-201ENSMUST00000117838 404 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Scn2bQ56A07 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.3□□□□□ -0.44
Scn2bQ56A07 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.3□□□□□ -0.44
Scn2bQ56A07 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Gm16177-201ENSMUST00000120728 718 ntBASIC12.3□□□□□ -0.44
Scn2bQ56A07 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.3□□□□□ -0.44
Scn2bQ56A07 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms