Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm13351-201ENSMUST00000118087 414 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm24248-201ENSMUST00000157321 322 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm9507-202ENSMUST00000180157 654 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm28745-201ENSMUST00000190069 305 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm5870-201ENSMUST00000196461 282 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm43377-201ENSMUST00000201640 455 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vars2Q3U2A8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm23272-201ENSMUST00000104053 129 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm12453-201ENSMUST00000121981 331 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm22993-201ENSMUST00000175423 254 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Trav11n-201ENSMUST00000200113 343 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vars2Q3U2A8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm6655-201ENSMUST00000201932 1309 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm14892-201ENSMUST00000117636 267 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm17214-201ENSMUST00000164501 541 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Ighv1-2-201ENSMUST00000195325 378 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm29763-201ENSMUST00000205306 616 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Gm6390-201ENSMUST00000215034 589 ntBASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vars2Q3U2A8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms