Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm13786-201ENSMUST00000122371 333 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm2546-201ENSMUST00000182630 991 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm29396-201ENSMUST00000185659 716 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm37489-201ENSMUST00000191883 159 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm7046-201ENSMUST00000221351 977 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm9823-201ENSMUST00000051212 327 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.94□□□□□ -0.66
Thbs3Q05895 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Thbs3Q05895 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Thbs3Q05895 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm14999-201ENSMUST00000121039 624 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm44958-201ENSMUST00000203734 736 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm39404-201ENSMUST00000216350 313 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.93□□□□□ -0.66
Thbs3Q05895 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Thbs3Q05895 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Thbs3Q05895 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms