Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.57■□□□□ 0.08
Nkx2-3P97334 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-3P97334 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.57■□□□□ 0.08
Nkx2-3P97334 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Gm43184-201ENSMUST00000197247 542 ntBASIC15.56■□□□□ 0.08
Nkx2-3P97334 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Thoc7-209ENSMUST00000225325 765 ntBASIC15.56■□□□□ 0.08
Nkx2-3P97334 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.56■□□□□ 0.08
Nkx2-3P97334 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-3P97334 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Gm11511-201ENSMUST00000118146 540 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Gm12029-201ENSMUST00000120073 832 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Gm10731-201ENSMUST00000181171 448 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Gm18711-201ENSMUST00000199341 750 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-3P97334 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.55■□□□□ 0.08
Nkx2-3P97334 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-3P97334 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm13809-201ENSMUST00000117921 597 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm5419-201ENSMUST00000119301 527 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.54■□□□□ 0.08
Nkx2-3P97334 Mir8115-201ENSMUST00000184992 119 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm10774-201ENSMUST00000188689 204 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm42629-201ENSMUST00000199063 1102 ntBASIC15.54■□□□□ 0.08
Nkx2-3P97334 Gm43916-201ENSMUST00000205062 967 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms