Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.31□□□□□ -0.44
Pdx1P52946 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.31□□□□□ -0.44
Pdx1P52946 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Pdx1P52946 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.31□□□□□ -0.44
Pdx1P52946 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pdx1P52946 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Pdx1P52946 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Pdx1P52946 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdx1P52946 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Gm23119-201ENSMUST00000158610 140 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.3□□□□□ -0.44
Pdx1P52946 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pdx1P52946 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm6621-201ENSMUST00000193251 772 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm42937-201ENSMUST00000197360 752 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm9368-201ENSMUST00000219348 831 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm24136-201ENSMUST00000083374 165 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pdx1P52946 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pdx1P52946 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdx1P52946 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pdx1P52946 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.3□□□□□ -0.44
Pdx1P52946 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.3□□□□□ -0.44
Pdx1P52946 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pdx1P52946 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Pdx1P52946 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Pdx1P52946 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdx1P52946 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdx1P52946 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdx1P52946 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdx1P52946 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdx1P52946 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdx1P52946 Gm12241-201ENSMUST00000118330 726 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Gm9083-201ENSMUST00000120423 819 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.29□□□□□ -0.44
Pdx1P52946 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.29□□□□□ -0.44
Pdx1P52946 Gm13570-201ENSMUST00000140763 309 ntBASIC12.29□□□□□ -0.44
Pdx1P52946 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Pdx1P52946 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdx1P52946 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms