Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Gm15371-201ENSMUST00000117057 784 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Gm28631-201ENSMUST00000190740 334 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 Gm10576-201ENSMUST00000191927 825 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Mir339-201ENSMUST00000083659 96 ntBASIC10.31□□□□□ -0.76
Nkx2-1P50220 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nkx2-1P50220 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.3□□□□□ -0.76
Nkx2-1P50220 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.3□□□□□ -0.76
Nkx2-1P50220 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.3□□□□□ -0.76
Nkx2-1P50220 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nkx2-1P50220 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.3□□□□□ -0.76
Nkx2-1P50220 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nkx2-1P50220 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms