Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1dP43277 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1dP43277 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hist1h1dP43277 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1dP43277 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hist1h1dP43277 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.52□□□□□ -0.72
Hist1h1dP43277 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist1h1dP43277 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist1h1dP43277 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.52□□□□□ -0.72
Hist1h1dP43277 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hist1h1dP43277 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist1h1dP43277 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hist1h1dP43277 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gm37497-201ENSMUST00000195830 798 ntBASIC10.52□□□□□ -0.73
Hist1h1dP43277 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gm24526-201ENSMUST00000082921 158 ntBASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gm24136-201ENSMUST00000083374 165 ntBASIC10.52□□□□□ -0.73
Hist1h1dP43277 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hist1h1dP43277 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.51□□□□□ -0.73
Hist1h1dP43277 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm27331-201ENSMUST00000183705 60 ntBASIC10.51□□□□□ -0.73
Hist1h1dP43277 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.51□□□□□ -0.73
Hist1h1dP43277 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.51□□□□□ -0.73
Hist1h1dP43277 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hist1h1dP43277 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms