Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 PCDHB19P-201ENST00000570871 2371 ntBASIC20.55■□□□□ 0.88
USP6P35125 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
USP6P35125 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USP6P35125 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC20.55■□□□□ 0.88
USP6P35125 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.55■□□□□ 0.88
USP6P35125 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.55■□□□□ 0.88
USP6P35125 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.55■□□□□ 0.88
USP6P35125 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC20.55■□□□□ 0.88
USP6P35125 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.55■□□□□ 0.88
USP6P35125 AC132192.2-201ENST00000596206 1147 ntBASIC20.55■□□□□ 0.88
USP6P35125 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.55■□□□□ 0.88
USP6P35125 AC004923.1-202ENST00000642106 209 ntBASIC20.55■□□□□ 0.88
USP6P35125 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
USP6P35125 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
USP6P35125 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 E2F3P2-201ENST00000447755 1422 ntBASIC20.55■□□□□ 0.88
USP6P35125 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.55■□□□□ 0.88
USP6P35125 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP6P35125 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
USP6P35125 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
USP6P35125 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.54■□□□□ 0.88
USP6P35125 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP6P35125 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.54■□□□□ 0.88
USP6P35125 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP6P35125 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP6P35125 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.54■□□□□ 0.88
USP6P35125 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.54■□□□□ 0.88
USP6P35125 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.54■□□□□ 0.88
USP6P35125 AL160314.3-201ENST00000556041 767 ntBASIC20.54■□□□□ 0.88
USP6P35125 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.54■□□□□ 0.88
USP6P35125 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP6P35125 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
USP6P35125 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.54■□□□□ 0.88
USP6P35125 AL138725.1-201ENST00000407347 1314 ntBASIC20.54■□□□□ 0.88
USP6P35125 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.54■□□□□ 0.88
USP6P35125 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP6P35125 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
USP6P35125 AL513523.2-202ENST00000427283 2040 ntBASIC20.54■□□□□ 0.88
USP6P35125 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.54■□□□□ 0.88
USP6P35125 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
USP6P35125 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.53■□□□□ 0.88
USP6P35125 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
USP6P35125 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.53■□□□□ 0.88
USP6P35125 AL596276.2-201ENST00000447525 331 ntBASIC20.53■□□□□ 0.88
USP6P35125 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.53■□□□□ 0.88
USP6P35125 AC134698.3-201ENST00000523880 214 ntBASIC20.53■□□□□ 0.88
USP6P35125 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.53■□□□□ 0.88
USP6P35125 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
USP6P35125 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 MIR4706-201ENST00000582134 82 ntBASIC20.53■□□□□ 0.88
USP6P35125 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.53■□□□□ 0.88
USP6P35125 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 AC128714.1-201ENST00000637035 887 ntBASIC20.53■□□□□ 0.88
USP6P35125 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
USP6P35125 AL359258.3-201ENST00000622910 2331 ntBASIC20.53■□□□□ 0.88
USP6P35125 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
USP6P35125 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
USP6P35125 AL133466.1-201ENST00000447582 150 ntBASIC20.53■□□□□ 0.88
USP6P35125 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 TMEM198B-204ENST00000484016 896 ntBASIC20.53■□□□□ 0.88
USP6P35125 AC125604.1-201ENST00000496255 707 ntBASIC20.53■□□□□ 0.88
USP6P35125 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.53■□□□□ 0.88
USP6P35125 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.53■□□□□ 0.88
USP6P35125 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.53■□□□□ 0.88
USP6P35125 AL161670.2-201ENST00000557650 1227 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms