Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Ccl3P10855 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.97□□□□□ -0.65
Ccl3P10855 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ccl3P10855 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Ccl3P10855 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.96□□□□□ -0.65
Ccl3P10855 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Ccl3P10855 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.96□□□□□ -0.65
Ccl3P10855 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ccl3P10855 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Ccl3P10855 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Ccl3P10855 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Ccl3P10855 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.96□□□□□ -0.65
Ccl3P10855 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gm7722-201ENSMUST00000120646 741 ntBASIC10.96□□□□□ -0.65
Ccl3P10855 Gm27530-201ENSMUST00000184096 98 ntBASIC10.96□□□□□ -0.65
Ccl3P10855 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gm4157-201ENSMUST00000211647 679 ntBASIC10.96□□□□□ -0.65
Ccl3P10855 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.96□□□□□ -0.65
Ccl3P10855 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.96□□□□□ -0.65
Ccl3P10855 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.96□□□□□ -0.65
Ccl3P10855 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ccl3P10855 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ccl3P10855 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl3P10855 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl3P10855 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl3P10855 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.96□□□□□ -0.66
Ccl3P10855 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Ccl3P10855 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl3P10855 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl3P10855 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ccl3P10855 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ccl3P10855 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Ccl3P10855 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ccl3P10855 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccl3P10855 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.95□□□□□ -0.66
Ccl3P10855 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl3P10855 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl3P10855 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccl3P10855 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.95□□□□□ -0.66
Ccl3P10855 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl3P10855 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.95□□□□□ -0.66
Ccl3P10855 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.95□□□□□ -0.66
Ccl3P10855 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Gm8100-201ENSMUST00000182906 988 ntBASIC10.95□□□□□ -0.66
Ccl3P10855 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.95□□□□□ -0.66
Ccl3P10855 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Gm45219-201ENSMUST00000205602 465 ntBASIC10.95□□□□□ -0.66
Ccl3P10855 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.95□□□□□ -0.66
Ccl3P10855 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ccl3P10855 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.95□□□□□ -0.66
Ccl3P10855 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl3P10855 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Ccl3P10855 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms