Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
UbbP0CG49 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UbbP0CG49 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.84□□□□□ -0.67
UbbP0CG49 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
UbbP0CG49 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.83□□□□□ -0.68
UbbP0CG49 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
UbbP0CG49 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.83□□□□□ -0.68
UbbP0CG49 Gm11637-201ENSMUST00000120601 592 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.83□□□□□ -0.68
UbbP0CG49 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 Gm42599-201ENSMUST00000201308 469 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.83□□□□□ -0.68
UbbP0CG49 Gm44855-201ENSMUST00000205725 362 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
UbbP0CG49 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.83□□□□□ -0.68
UbbP0CG49 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UbbP0CG49 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.83□□□□□ -0.68
UbbP0CG49 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UbbP0CG49 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm12384-201ENSMUST00000119228 919 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Gm15703-201ENSMUST00000120250 880 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Gm14760-201ENSMUST00000121831 999 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UbbP0CG49 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.82□□□□□ -0.68
UbbP0CG49 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.82□□□□□ -0.68
UbbP0CG49 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
UbbP0CG49 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UbbP0CG49 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.82□□□□□ -0.68
UbbP0CG49 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms