Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.86□□□□□ -0.67
PtcraP0C6B2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
PtcraP0C6B2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.85□□□□□ -0.67
PtcraP0C6B2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Gm14127-201ENSMUST00000117906 678 ntBASIC10.85□□□□□ -0.67
PtcraP0C6B2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.85□□□□□ -0.67
PtcraP0C6B2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.85□□□□□ -0.67
PtcraP0C6B2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.85□□□□□ -0.67
PtcraP0C6B2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.85□□□□□ -0.67
PtcraP0C6B2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
PtcraP0C6B2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.84□□□□□ -0.67
PtcraP0C6B2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm27390-201ENSMUST00000184516 176 ntBASIC10.84□□□□□ -0.67
PtcraP0C6B2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm6013-201ENSMUST00000212264 699 ntBASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm45880-201ENSMUST00000213041 853 ntBASIC10.84□□□□□ -0.67
PtcraP0C6B2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.84□□□□□ -0.67
PtcraP0C6B2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm10478-201ENSMUST00000084451 396 ntBASIC10.84□□□□□ -0.67
PtcraP0C6B2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
PtcraP0C6B2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms