Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa4P06728 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Gm25927-201ENSMUST00000175058 117 ntBASIC12.24□□□□□ -0.45
Apoa4P06728 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.24□□□□□ -0.45
Apoa4P06728 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.24□□□□□ -0.45
Apoa4P06728 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.24□□□□□ -0.45
Apoa4P06728 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Apoa4P06728 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.24□□□□□ -0.45
Apoa4P06728 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Apoa4P06728 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa4P06728 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa4P06728 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa4P06728 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Apoa4P06728 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Apoa4P06728 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.23□□□□□ -0.45
Apoa4P06728 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm24231-201ENSMUST00000104315 133 ntBASIC12.23□□□□□ -0.45
Apoa4P06728 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.23□□□□□ -0.45
Apoa4P06728 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.23□□□□□ -0.45
Apoa4P06728 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm7561-201ENSMUST00000211203 886 ntBASIC12.23□□□□□ -0.45
Apoa4P06728 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Apoa4P06728 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Apoa4P06728 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Apoa4P06728 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Apoa4P06728 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Apoa4P06728 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.23□□□□□ -0.45
Apoa4P06728 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa4P06728 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Apoa4P06728 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.22□□□□□ -0.45
Apoa4P06728 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Snord83b-201ENSMUST00000104546 94 ntBASIC12.22□□□□□ -0.45
Apoa4P06728 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.22□□□□□ -0.45
Apoa4P06728 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.22□□□□□ -0.45
Apoa4P06728 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.22□□□□□ -0.45
Apoa4P06728 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Rmrp-201ENSMUST00000157463 271 ntBASIC12.22□□□□□ -0.45
Apoa4P06728 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Apoa4P06728 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Apoa4P06728 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Apoa4P06728 Gm26927-201ENSMUST00000182385 965 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms