Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cxcl13O55038 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.53□□□□□ -0.72
Cxcl13O55038 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Cxcl13O55038 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Cxcl13O55038 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cxcl13O55038 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm29615-201ENSMUST00000185371 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28224-201ENSMUST00000186078 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm29001-201ENSMUST00000186177 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28292-201ENSMUST00000186593 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28101-201ENSMUST00000187608 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm29076-201ENSMUST00000187689 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28302-201ENSMUST00000187931 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28646-201ENSMUST00000188220 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28205-201ENSMUST00000189177 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm29032-201ENSMUST00000189797 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm28695-201ENSMUST00000190300 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm37448-201ENSMUST00000192795 697 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm19994-201ENSMUST00000217086 586 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.52□□□□□ -0.73
Cxcl13O55038 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cxcl13O55038 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Cxcl13O55038 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cxcl13O55038 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cxcl13O55038 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.51□□□□□ -0.73
Cxcl13O55038 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cxcl13O55038 Gm11989-201ENSMUST00000117240 672 ntBASIC10.51□□□□□ -0.73
Cxcl13O55038 Gm11362-201ENSMUST00000118838 850 ntBASIC10.51□□□□□ -0.73
Cxcl13O55038 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.51□□□□□ -0.73
Cxcl13O55038 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms