Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Limk2O54785 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Limk2O54785 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Limk2O54785 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Limk2O54785 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.64□□□□□ -0.39
Limk2O54785 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Gm24990-201ENSMUST00000157406 323 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Limk2O54785 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.64□□□□□ -0.39
Limk2O54785 Gm18304-201ENSMUST00000189162 546 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.64□□□□□ -0.39
Limk2O54785 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Limk2O54785 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.64□□□□□ -0.39
Limk2O54785 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.64□□□□□ -0.39
Limk2O54785 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Limk2O54785 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm13875-201ENSMUST00000120162 282 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.63□□□□□ -0.39
Limk2O54785 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm23119-201ENSMUST00000158610 140 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Limk2O54785 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gm18212-201ENSMUST00000211678 889 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm10076-201ENSMUST00000073238 384 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.63□□□□□ -0.39
Limk2O54785 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Limk2O54785 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.63□□□□□ -0.39
Limk2O54785 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Limk2O54785 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.62□□□□□ -0.39
Limk2O54785 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms