Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gm5866-201ENSMUST00000177881 973 ntBASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm11127A7VMS2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Mir7654-201ENSMUST00000185082 70 ntBASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Gm44397-201ENSMUST00000195950 113 ntBASIC11.04□□□□□ -0.64
Gm11127A7VMS2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.04□□□□□ -0.64
Gm11127A7VMS2 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Itm2b-204ENSMUST00000228637 783 ntBASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm11127A7VMS2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.03□□□□□ -0.64
Gm11127A7VMS2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms