Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm12728V9GX31 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12728V9GX31 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12728V9GX31 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm12728V9GX31 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12728V9GX31 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm12728V9GX31 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm12728V9GX31 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.69■□□□□ 0.26
Gm12728V9GX31 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm12728V9GX31 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm12728V9GX31 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.68■□□□□ 0.26
Gm12728V9GX31 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.67■□□□□ 0.26
Gm12728V9GX31 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm12728V9GX31 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm12728V9GX31 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm12728V9GX31 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm12728V9GX31 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm12728V9GX31 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm12728V9GX31 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Notumos-201ENSMUST00000151998 2659 ntBASIC16.61■□□□□ 0.25
Gm12728V9GX31 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm12728V9GX31 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms