Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Crlf3Q9Z2L7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crlf3Q9Z2L7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Crlf3Q9Z2L7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Crlf3Q9Z2L7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crlf3Q9Z2L7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Crlf3Q9Z2L7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Crlf3Q9Z2L7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Crlf3Q9Z2L7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Crlf3Q9Z2L7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf3Q9Z2L7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Crlf3Q9Z2L7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf3Q9Z2L7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf3Q9Z2L7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf3Q9Z2L7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Crlf3Q9Z2L7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Gm12366-201ENSMUST00000121722 873 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Gm5786-201ENSMUST00000085368 882 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Crlf3Q9Z2L7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Crlf3Q9Z2L7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Crlf3Q9Z2L7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Crlf3Q9Z2L7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crlf3Q9Z2L7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crlf3Q9Z2L7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crlf3Q9Z2L7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms