Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn3Q9Z0G9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn3Q9Z0G9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn3Q9Z0G9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn3Q9Z0G9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn3Q9Z0G9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn3Q9Z0G9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn3Q9Z0G9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cldn3Q9Z0G9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Cldn3Q9Z0G9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn3Q9Z0G9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Cldn3Q9Z0G9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.11■□□□□ 0.97
Cldn3Q9Z0G9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn3Q9Z0G9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.1■□□□□ 0.97
Cldn3Q9Z0G9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cldn3Q9Z0G9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn3Q9Z0G9 Gm15546-201ENSMUST00000122095 826 ntBASIC21.1■□□□□ 0.97
Cldn3Q9Z0G9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cldn3Q9Z0G9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cldn3Q9Z0G9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.09■□□□□ 0.97
Cldn3Q9Z0G9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Cldn3Q9Z0G9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn3Q9Z0G9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn3Q9Z0G9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn3Q9Z0G9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn3Q9Z0G9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.08■□□□□ 0.97
Cldn3Q9Z0G9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.08■□□□□ 0.97
Cldn3Q9Z0G9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.08■□□□□ 0.97
Cldn3Q9Z0G9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn3Q9Z0G9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn3Q9Z0G9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn3Q9Z0G9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cldn3Q9Z0G9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cldn3Q9Z0G9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Cldn3Q9Z0G9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn3Q9Z0G9 Gm10399-202ENSMUST00000202768 748 ntBASIC21.07■□□□□ 0.96
Cldn3Q9Z0G9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn3Q9Z0G9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.07■□□□□ 0.96
Cldn3Q9Z0G9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn3Q9Z0G9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn3Q9Z0G9 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.06■□□□□ 0.96
Cldn3Q9Z0G9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn3Q9Z0G9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn3Q9Z0G9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn3Q9Z0G9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn3Q9Z0G9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn3Q9Z0G9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn3Q9Z0G9 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.02■□□□□ 0.96
Cldn3Q9Z0G9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn3Q9Z0G9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn3Q9Z0G9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms