Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gpc6Q9R087 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gpc6Q9R087 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gpc6Q9R087 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gpc6Q9R087 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gpc6Q9R087 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gpc6Q9R087 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.29■□□□□ 0.68
Gpc6Q9R087 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gpc6Q9R087 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gpc6Q9R087 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.27■□□□□ 0.68
Gpc6Q9R087 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gpc6Q9R087 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.27■□□□□ 0.68
Gpc6Q9R087 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gpc6Q9R087 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gpc6Q9R087 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gpc6Q9R087 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gpc6Q9R087 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gpc6Q9R087 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.27■□□□□ 0.68
Gpc6Q9R087 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gpc6Q9R087 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gpc6Q9R087 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.27■□□□□ 0.67
Gpc6Q9R087 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gpc6Q9R087 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gpc6Q9R087 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.26■□□□□ 0.67
Gpc6Q9R087 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gpc6Q9R087 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gpc6Q9R087 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gpc6Q9R087 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gpc6Q9R087 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gpc6Q9R087 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.24■□□□□ 0.67
Gpc6Q9R087 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Gpc6Q9R087 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gpc6Q9R087 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gpc6Q9R087 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gpc6Q9R087 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gpc6Q9R087 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gpc6Q9R087 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gpc6Q9R087 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.21■□□□□ 0.67
Gpc6Q9R087 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gpc6Q9R087 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gpc6Q9R087 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms