Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.99■■□□□ 1.11
Scn5aQ9JJV9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn5aQ9JJV9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn5aQ9JJV9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.97■■□□□ 1.11
Scn5aQ9JJV9 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Gm9870-201ENSMUST00000063874 645 ntBASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn5aQ9JJV9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Scn5aQ9JJV9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.95■■□□□ 1.1
Scn5aQ9JJV9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn5aQ9JJV9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.95■■□□□ 1.1
Scn5aQ9JJV9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Scn5aQ9JJV9 Mir7075-201ENSMUST00000184187 82 ntBASIC21.95■■□□□ 1.1
Scn5aQ9JJV9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn5aQ9JJV9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn5aQ9JJV9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn5aQ9JJV9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn5aQ9JJV9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn5aQ9JJV9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn5aQ9JJV9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn5aQ9JJV9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn5aQ9JJV9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Gm43173-201ENSMUST00000202246 593 ntBASIC21.89■■□□□ 1.09
Scn5aQ9JJV9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.88■■□□□ 1.09
Scn5aQ9JJV9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn5aQ9JJV9 Gm8495-201ENSMUST00000188740 694 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms