Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim39Q9ESN2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trim39Q9ESN2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim39Q9ESN2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim39Q9ESN2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim39Q9ESN2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim39Q9ESN2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim39Q9ESN2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim39Q9ESN2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim39Q9ESN2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim39Q9ESN2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim39Q9ESN2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim39Q9ESN2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim39Q9ESN2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim39Q9ESN2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim39Q9ESN2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim39Q9ESN2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim39Q9ESN2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim39Q9ESN2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim39Q9ESN2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.26■□□□□ 0.67
Trim39Q9ESN2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim39Q9ESN2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim39Q9ESN2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim39Q9ESN2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim39Q9ESN2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms