Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Rsph9Q9D9V4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Gm12922-201ENSMUST00000120626 809 ntBASIC20.47■□□□□ 0.87
Rsph9Q9D9V4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rsph9Q9D9V4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rsph9Q9D9V4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rsph9Q9D9V4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rsph9Q9D9V4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rsph9Q9D9V4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rsph9Q9D9V4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rsph9Q9D9V4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rsph9Q9D9V4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.39■□□□□ 0.86
Rsph9Q9D9V4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rsph9Q9D9V4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.39■□□□□ 0.86
Rsph9Q9D9V4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rsph9Q9D9V4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rsph9Q9D9V4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rsph9Q9D9V4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms