Protein–RNA interactions for Protein: Q9D9V3

Echdc1, Ethylmalonyl-CoA decarboxylase, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1Q9D9V3 Gm12922-201ENSMUST00000120626 809 ntBASIC26.29■■□□□ 1.8
Echdc1Q9D9V3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Echdc1Q9D9V3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Echdc1Q9D9V3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Echdc1Q9D9V3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Echdc1Q9D9V3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Echdc1Q9D9V3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.27■■□□□ 1.8
Echdc1Q9D9V3 Gm9847-201ENSMUST00000052528 599 ntBASIC26.27■■□□□ 1.8
Echdc1Q9D9V3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Echdc1Q9D9V3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Echdc1Q9D9V3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Echdc1Q9D9V3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC26.26■■□□□ 1.79
Echdc1Q9D9V3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Echdc1Q9D9V3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Echdc1Q9D9V3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Echdc1Q9D9V3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Echdc1Q9D9V3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Echdc1Q9D9V3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Echdc1Q9D9V3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Echdc1Q9D9V3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Echdc1Q9D9V3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Echdc1Q9D9V3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Gm13241-201ENSMUST00000094493 780 ntBASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Gm37415-201ENSMUST00000192265 2054 ntBASIC26.23■■□□□ 1.79
Echdc1Q9D9V3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Echdc1Q9D9V3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Echdc1Q9D9V3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.22■■□□□ 1.79
Echdc1Q9D9V3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Echdc1Q9D9V3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Echdc1Q9D9V3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Echdc1Q9D9V3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Echdc1Q9D9V3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Echdc1Q9D9V3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.21■■□□□ 1.79
Echdc1Q9D9V3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Echdc1Q9D9V3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
Echdc1Q9D9V3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Echdc1Q9D9V3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
Echdc1Q9D9V3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Echdc1Q9D9V3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.19■■□□□ 1.78
Echdc1Q9D9V3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.19■■□□□ 1.78
Echdc1Q9D9V3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Echdc1Q9D9V3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Echdc1Q9D9V3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Gm21956-201ENSMUST00000179946 522 ntBASIC26.17■■□□□ 1.78
Echdc1Q9D9V3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Echdc1Q9D9V3 Gm9870-201ENSMUST00000063874 645 ntBASIC26.16■■□□□ 1.78
Echdc1Q9D9V3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Echdc1Q9D9V3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Echdc1Q9D9V3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Echdc1Q9D9V3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Golgb1-201ENSMUST00000023534 498 ntBASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Echdc1Q9D9V3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Echdc1Q9D9V3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
Echdc1Q9D9V3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Echdc1Q9D9V3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Echdc1Q9D9V3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Echdc1Q9D9V3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC26.13■■□□□ 1.77
Echdc1Q9D9V3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Echdc1Q9D9V3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Echdc1Q9D9V3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Echdc1Q9D9V3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.12■■□□□ 1.77
Echdc1Q9D9V3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Echdc1Q9D9V3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms