Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Calr3Q9D9Q6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Calr3Q9D9Q6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Calr3Q9D9Q6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Calr3Q9D9Q6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.52■■□□□ 1.04
Calr3Q9D9Q6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Calr3Q9D9Q6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Calr3Q9D9Q6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Calr3Q9D9Q6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.5■■□□□ 1.03
Calr3Q9D9Q6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.5■■□□□ 1.03
Calr3Q9D9Q6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Calr3Q9D9Q6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Calr3Q9D9Q6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Calr3Q9D9Q6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Calr3Q9D9Q6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Calr3Q9D9Q6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Calr3Q9D9Q6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Calr3Q9D9Q6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Calr3Q9D9Q6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Calr3Q9D9Q6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Calr3Q9D9Q6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Calr3Q9D9Q6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Calr3Q9D9Q6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Calr3Q9D9Q6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Calr3Q9D9Q6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Calr3Q9D9Q6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Calr3Q9D9Q6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Calr3Q9D9Q6 Mir3960-201ENSMUST00000198213 73 ntBASIC21.44■■□□□ 1.02
Calr3Q9D9Q6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.44■■□□□ 1.02
Calr3Q9D9Q6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Calr3Q9D9Q6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.43■■□□□ 1.02
Calr3Q9D9Q6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms