Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn22Q9D7U6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn22Q9D7U6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn22Q9D7U6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cldn22Q9D7U6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cldn22Q9D7U6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn22Q9D7U6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn22Q9D7U6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn22Q9D7U6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn22Q9D7U6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
Cldn22Q9D7U6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cldn22Q9D7U6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn22Q9D7U6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn22Q9D7U6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Cldn22Q9D7U6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn22Q9D7U6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cldn22Q9D7U6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cldn22Q9D7U6 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.92■□□□□ 0.94
Cldn22Q9D7U6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cldn22Q9D7U6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn22Q9D7U6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Etf1-202ENSMUST00000180351 108 ntBASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn22Q9D7U6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn22Q9D7U6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn22Q9D7U6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn22Q9D7U6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn22Q9D7U6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn22Q9D7U6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn22Q9D7U6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn22Q9D7U6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn22Q9D7U6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cldn22Q9D7U6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn22Q9D7U6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.86■□□□□ 0.93
Cldn22Q9D7U6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn22Q9D7U6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn22Q9D7U6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.85■□□□□ 0.93
Cldn22Q9D7U6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.85■□□□□ 0.93
Cldn22Q9D7U6 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.85■□□□□ 0.93
Cldn22Q9D7U6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms