Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim42Q9D2H5 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.73■□□□□ 0.91
Trim42Q9D2H5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim42Q9D2H5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim42Q9D2H5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim42Q9D2H5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim42Q9D2H5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Gm44428-201ENSMUST00000204474 874 ntBASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim42Q9D2H5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim42Q9D2H5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.71■□□□□ 0.91
Trim42Q9D2H5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Trim42Q9D2H5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim42Q9D2H5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.69■□□□□ 0.9
Trim42Q9D2H5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Trim42Q9D2H5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim42Q9D2H5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim42Q9D2H5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim42Q9D2H5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim42Q9D2H5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.67■□□□□ 0.9
Trim42Q9D2H5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim42Q9D2H5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Gm7432-201ENSMUST00000210343 879 ntBASIC20.66■□□□□ 0.9
Trim42Q9D2H5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim42Q9D2H5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim42Q9D2H5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim42Q9D2H5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim42Q9D2H5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim42Q9D2H5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim42Q9D2H5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim42Q9D2H5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim42Q9D2H5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim42Q9D2H5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim42Q9D2H5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim42Q9D2H5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms