Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssbp1Q9CYR0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ssbp1Q9CYR0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
Ssbp1Q9CYR0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ssbp1Q9CYR0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ssbp1Q9CYR0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Gm16148-201ENSMUST00000119653 893 ntBASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ssbp1Q9CYR0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.23■□□□□ 0.03
Ssbp1Q9CYR0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssbp1Q9CYR0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.22■□□□□ 0.03
Ssbp1Q9CYR0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssbp1Q9CYR0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssbp1Q9CYR0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssbp1Q9CYR0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Ssbp1Q9CYR0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ssbp1Q9CYR0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssbp1Q9CYR0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssbp1Q9CYR0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssbp1Q9CYR0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ssbp1Q9CYR0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssbp1Q9CYR0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssbp1Q9CYR0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.18■□□□□ 0.02
Ssbp1Q9CYR0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssbp1Q9CYR0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssbp1Q9CYR0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.18■□□□□ 0.02
Ssbp1Q9CYR0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssbp1Q9CYR0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssbp1Q9CYR0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssbp1Q9CYR0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssbp1Q9CYR0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ssbp1Q9CYR0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms