Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssu72Q9CY97 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.85■□□□□ 0.93
Ssu72Q9CY97 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssu72Q9CY97 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ssu72Q9CY97 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssu72Q9CY97 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssu72Q9CY97 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ssu72Q9CY97 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssu72Q9CY97 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssu72Q9CY97 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssu72Q9CY97 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssu72Q9CY97 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssu72Q9CY97 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssu72Q9CY97 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssu72Q9CY97 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssu72Q9CY97 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssu72Q9CY97 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.8■□□□□ 0.92
Ssu72Q9CY97 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssu72Q9CY97 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssu72Q9CY97 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ssu72Q9CY97 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssu72Q9CY97 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ssu72Q9CY97 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ssu72Q9CY97 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssu72Q9CY97 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssu72Q9CY97 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Gm6311-201ENSMUST00000073790 878 ntBASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ssu72Q9CY97 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssu72Q9CY97 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ssu72Q9CY97 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ssu72Q9CY97 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ssu72Q9CY97 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ssu72Q9CY97 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ssu72Q9CY97 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.76■□□□□ 0.91
Ssu72Q9CY97 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssu72Q9CY97 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ssu72Q9CY97 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.74■□□□□ 0.91
Ssu72Q9CY97 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ssu72Q9CY97 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms